ANTsR - ANTs in R: Quantification Tools for Biomedical Images
Quantification tools for biomedical images that interface state of the art image processing with R statistical methods. The project grew out of the need, at University of Pennsylvania, to develop large-scale analytics pipelines that track provenance from scanner to scientific study. ANTsR wraps an ANTs and ITK C++ core via Rcpp to access these frameworks from within R and support reproducible analyses. Specialized functionality in ANTsR includes image segmentation and registration along imaging specific variations of principal component and canonical correlation analysis.
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braindecompositionmriregistrationsegmentation
9.53 score 144 stars 372 scriptsANTsRCore - Core Software Infrastructure for 'ANTsR'
'ANTsR' interfaces state of the art image processing with R statistical methods but relies on underlying 'ANTs' C++. This package provides the underlying C++ framework on which 'ANTsR' depends.
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cpp
5.36 score 10 stars 1 dependents 63 scriptsITKR - ITK in R
Make the state of the art image processing library, ITK, available within R. Provide developer access to the ITK framework from within R and, ultimately, support reproducible statistical analyses of medical images via interfacing with other packages.
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4.23 score 8 stars 1 dependents 5 scripts